Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVPNKQSQNVQNHRPYGGVVPQGMTQAQYTELEKTLPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHALPLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQDHMNQNTHMNQQPQIQQGHMQSSNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRSTNK |
2H3O Chain:A ((54-70)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FIGLTIYAIQRKRQADA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1836 for 63 contacts (-29.1/contact) +
2D Compatibility (PS) -1900 + (NN) -1997 + (LL) 12008
1D Compatibility (HY) -800 + (ID) 50
Total energy: 5425.0 ( 86.11 by residue)
QMean score : -0.325
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