Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSNIVQDPRVLKQIETIKGVTNDYKIVGMNNSQATNRRLENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPDVIHANDFDVL-LMVYLSNYKK-ANIVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTVSHAAKEYYQSKGYK-KEANVITNAPILNDSRE------------FKEIENFKEIVYQGQIVMDRGYEEFIIASSAFKQ--NAPSFIIRGFGPHEEVIKELISYNSENIRLDKPVEVKELVDKLAESNVGVILTKPVS-INFEYTVSNKIFECIHAGLPVILSPVKEHIYLNEKYKFGIVLKEVTPLEIEKAVRKLRDNHDLFNHLRQNAIK-ASKILNWQIESERLVELYKF |
| 3OKP Chain:A ((78-377)) | ------------------------------------------------------------------------------MAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSM--L-----PGSRQSLRKIGT-EVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP-ATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117861 for 2310 contacts (-51.0/contact) +
2D Compatibility (PS) -30254 + (NN) -8129 + (LL) 6060
1D Compatibility (HY) -2000 + (ID) 1950
Total energy: -154134.0 ( -66.72 by residue)
QMean score : 0.433
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