Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTSEGVHH |
| 1PLP Chain:? ((1-25)) | ---------------------------------------------------------------------MDKVQYLTRSA--IRRASTIEMPQQAC----------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PLP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4499 for 92 contacts (48.9/contact) +
2D Compatibility (PS) -2294 + (NN) 1271 + (LL) 12204
1D Compatibility (HY) -800 + (ID) 500
Total energy: 14380.0 ( 156.30 by residue)
QMean score : 0.064
|
|
|