Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLILIVIGLIFTALGIAGAVLPLLPTTPFLLVAVFCFARSSDRFYNWLINQKIYKEYVENFYLHRGYTLQQKIKILISLYIVIGFSIYMVDVLAVRVGLIIMVIIQTAVLFTFVKTLPKSNHKIEE
3N7N Chain:E ((3-33))
-----------------------------------TLLQLLSNYYKAKLDSERIYNEYVQSQYEFA-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3N7N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2845 for 119 contacts (-23.9/contact) +
2D Compatibility (PS) -3114 + (NN) 208 + (LL) 10472
1D Compatibility (HY) -1200 + (ID) 400
Total energy: 3121.0 ( 26.23 by residue)
QMean score : 0.269
(partial model without unconserved sides chains):
PDB file :
Tito_3N7N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N7N-query.scw
PDB file :
Tito_Scwrl_3N7N.pdb
: