Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGKKANTINRYKYFHHVNHQKIQQSSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSDSFHMLSDVL--------------------ALGLSM------LAIYFASKKPTARYTFGYLRFEILVAFLNGLALIVISI-WILYEAIVRIIYPQPIESGIMFMIASI------------------GLLVNIILTIILVRSLKQEDNINIQSALWHFMGDLLNSIGVIVAVVLIYFT----GWRIIDPIISI--------VISLIILRGGYKITRNAWLILMESVPQHLDTDQIMADIKNIDGILDVHE----------------------FHLWSITTEHYSLSAHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT-------------------------------------------- |
3I4Z Chain:A ((7-464)) | ---MKAANASSAEAYRVLSRAFRFDNEDQKLWWHSTAPMFAKMLETANYTTPCQYQYLITYKECVIPSLGCYPTNSAPRWLSILTRYGTPFELSLNCSNSIVRYTFEPINQHTGTDKDPFNTHAIWESLQHLLPLEKSIDLEWFRHFKHDLTLNSEESAFLAHNDRLVGGTIRTQNKLALDLKDGRFALKTYIYPALKAVVTGKTIHELVFGSVRRLAVREPRILPPLNMLEEYIRSRGSKSTASPRLVSCDLTSPAKSRIKIYLLEQMVSLEAMEDLWTLGGRRRDASTLEGLSLVRELWDLIQLSPGLKSYPAPYLPLGVIPDERLPLMANFTLHQNDPVPEPQVYF-TTFGMNDMAVADALTTFFERRGWSEMARTYETTLKSYYPHADHDKLNYLHAYISFSYRDRTPYLSVYLQSFETGDWAVAPDLSKTGVYYSGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I4Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274241 for 2292 contacts (-119.7/contact) +
2D Compatibility (PS) -32498 + (NN) -4044 + (LL) -120
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -317503.0 ( -138.53 by residue)
QMean score : 0.307
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