Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVYS-INMNMYTRLLLLDE-NDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNN--N-TY------NMHKHINDIKILKDEDIDQLRKEKDKDDKSIYDKLIKAYNVKSLTTDGQKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGILSKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKN-AYQATFQRNPGFNETEKGSYGSPKIKNITLKFNGDPNNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIK-FYRGDKFKIASPITPLVDTGN----EQRQDLEKVEKAINQ |
| 3TPA Chain:A ((8-344)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NTLVNCI-ATAPMKLSPAITNDANDFNASSQQVYNRLVEFKAGKIEVE--PGLAERWEISEDGLVYTFYLRQNVKFHS---NKTFSPTRPLNADDVVFSFQRQADKNHPYHNVSAGTYFYFNWMNLPSILKSVEKVD-------------------------------------------DY-TVKITLNKPNTPFITTVAMDFLSIYSKEYADQLLAQ-----GK------PETLDQQPIGTGPFIFQTNQTDHAVRYTANVDYWK------GKADIERLIFSITPDAGTRYAKLKAGECDVIDFPNISDIAQMKKDPQINLLEREGLNLAYIGLNTTK-PELNNVKVRQALHHATDKKAIVDAVYQGGGTVATNPFPDAVLGYNPHLPQYEFNLEKAKALLAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39141 for 2281 contacts (-17.2/contact) +
2D Compatibility (PS) -33577 + (NN) -10596 + (LL) 14668
1D Compatibility (HY) -14800 + (ID) 3150
Total energy: -86596.0 ( -37.96 by residue)
QMean score : 0.414
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