Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTQMKIKTYLVAGIKAALLDTTGIKLASKSETTSHTYQHQALVDQLHELIANTDLNKLSYLNLDAFQKRDILAAHYIAKSAIRTKNLDQMTKAKQRLESIYNSISNPLHSQNN
2QFF Chain:A ((9-82))
------------------------------------EYQNEKLANELKSLLDELNVNELATGSLNTYYKRTIKISGQKA-YALKSKDFKKMSEAKYQLQKIYNEIDEALK----
General information:
TITO was launched using:
RESULT:
Template:
2QFF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11257 for 465 contacts (-24.2/contact) +
2D Compatibility (PS) -7952 + (NN) -4633 + (LL) 3036
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -24206.0 ( -52.06 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_2QFF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QFF-query.scw
PDB file :
Tito_Scwrl_2QFF.pdb
: