Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVVNLIMTKERRTFSSEFKLQMVRLY-KNGKLKNEIIRKYDLKPSIISNSIKQHQNTGPFNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI
2OA4 Chain:A ((28-82))
---------PANTRRWVASRKIAVVRGVIYGLITLAEAKQTYGLSDEEFNSWVSALAEHGKDAL-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OA4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -921 for 283 contacts (-3.3/contact) +
2D Compatibility (PS) -5683 + (NN) -2382 + (LL) 4740
1D Compatibility (HY) -800 + (ID) 400
Total energy: -5446.0 ( -19.24 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_2OA4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OA4-query.scw
PDB file :
Tito_Scwrl_2OA4.pdb
: