Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILKGSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
3ACC Chain:A ((12-179))
-------VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSY-----------LLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSRRQVEVPIHYLGFEIEDAYVYGYGLDRAQFDRNLPFITSIRPE----
General information:
TITO was launched using:
RESULT:
Template:
3ACC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128822 for 1223 contacts (-105.3/contact) +
2D Compatibility (PS) -16938 + (NN) -2425 + (LL) 740
1D Compatibility (HY) -18800 + (ID) 3200
Total energy: -169445.0 ( -138.55 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_3ACC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ACC-query.scw
PDB file :
Tito_Scwrl_3ACC.pdb
: