Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQR----KMMLESIRYVDLVIPEKGWGQ-KEDDVEKFDVDVFVMGHDWEGEFDF----------LKDKCEVIYLKRTEG---ISTTKIKQELYGKDAK
3L93 Chain:A ((5-137))
ITKAIYPGTFDPITNGHLDLVTRASAMFSHVILAIADSS-----SKKPMFTLDERVALAKKVTAPLKNVEVL----GFSELMAEFAKKHNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLIPSEKWSFISSSLVKE--------
General information:
TITO was launched using:
RESULT:
Template:
3L93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66719 for 807 contacts (-82.7/contact) +
2D Compatibility (PS) -12424 + (NN) -1892 + (LL) 1068
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -89067.0 ( -110.37 by residue)
QMean score : 0.472
(partial model without unconserved sides chains):
PDB file :
Tito_3L93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L93-query.scw
PDB file :
Tito_Scwrl_3L93.pdb
: