Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLIISIMAVMLFLTGCGKSQEKATLEKDIDNLQKENKELKDKKEKLQQEKEKLADKQKDLEKEVKDLKPSKEDNKDDKKDEDKNKDKDKDKEASQDKQSKDQTKSSDKDNHKKPTSTDKDQKANDKHQS
1SC7 Chain:A ((466-540))
-------------------------TFEKSMMNLQT----------KIDAKKEQLADARRDLKSAKADAKVMK-----DAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQ----------------
General information:
TITO was launched using:
RESULT:
Template:
1SC7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 62616 for 397 contacts (157.7/contact) +
2D Compatibility (PS) -8143 + (NN) -4191 + (LL) 3308
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: 50790.0 ( 127.93 by residue)
QMean score : 0.321
(partial model without unconserved sides chains):
PDB file :
Tito_1SC7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SC7-query.scw
PDB file :
Tito_Scwrl_1SC7.pdb
: