Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENANKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
2EYO Chain:A ((7-141))
-------------------------------------------------------------------------------------LHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNSHEQHLRKSEAQAKKEKLNIWS--------
General information:
TITO was launched using:
RESULT:
Template:
2EYO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40461 for 1072 contacts (-37.7/contact) +
2D Compatibility (PS) -14388 + (NN) -3438 + (LL) 5968
1D Compatibility (HY) -15600 + (ID) 6600
Total energy: -74519.0 ( -69.51 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_2EYO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EYO-query.scw
PDB file :
Tito_Scwrl_2EYO.pdb
: