Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLHFAILFWLALIFLVAATFILVLMKKTGKESKKESYLSFTVILYIFGFAILIYTFIFGVL
3DL8 Chain:E ((55-72))
-------TYWLGALFLVLALLLSVI-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8099 for 64 contacts (-126.5/contact) +
2D Compatibility (PS) -1897 + (NN) -1314 + (LL) 4360
1D Compatibility (HY) -3200 + (ID) 0
Total energy: -10150.0 ( -158.59 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_3DL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DL8-query.scw
PDB file :
Tito_Scwrl_3DL8.pdb
: