Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMG--HPSYEVTKGEVLLDGVNILELEV---DERAKAGLFLAMQYPS----EITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGE-NFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGP----ELAKRLEEEGYEWVKEEFGSAE |
| 4MKI Chain:B ((27-246)) | -------------------LKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPS----KGKIYINGIDITDKKVSLKDIRKQVGL--VFQYPEYQLFEETVFKDIAFGPSNLGLSEEEVKE--------RVYEAMEIVGISKELADKSPFE-LSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILVSHNMEDIARIA-DKIIVMNRGKIELIGTPREVFREAERLEKIG------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53560 for 1554 contacts (-34.5/contact) +
2D Compatibility (PS) -22056 + (NN) -4125 + (LL) 4296
1D Compatibility (HY) -12400 + (ID) 3550
Total energy: -91395.0 ( -58.81 by residue)
QMean score : 0.390
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