Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METLFSGIQPSGIPTIGNYIGALKQFVDVQNDYDCYFCIVDQHAITMPQDRLKLRKQTRQLAAIYLASGIDPDKATLFIQSEVPAHVQAGWMLTTIASVGELERMTQYKDKAQKAVEGIPAGLLTYPPLMAADIVLYNTNIVPVGDDQKQHIELTRNLVDRFNSRYNDVLVKPEIRMPKVGGRVMSLQDPTRKMSKSDDNAKNFISLLDEPNVAAKKIKSAVTDSDGIIKFDRDNKPGITNLISIYAGLTDMPIKDIEAKYE--GEGYGKFKGDLAEIVKAFLVEFQEKY-ESFYNSDKLDDILDQGRDKAHKVSFKTVKKMEKAMGLGRKR |
| 3TZL Chain:A ((6-322)) | ---VLTGLQPSGDLHIGNYFGAIKQMVDAQEKSQMFMFIANYHAMTSSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLERAHSYKDKVAKGLSA-SHGLFSYPVLMAADILLFDTRIVPVGKDQIQHVEIARDIALKVNNEWGEIFTLPEARVNEEVAVVVGTDGA--KMSKS---YQNTIDIFSSEKTLKKQISSIVTDSTALEDPKDHENCNIFKIAKLF--LDESGQKELQIRYEKGGEGYGHFKIYLNELVNAYFKEAREKYNELLEKPSHLKEILDFGATKARKIAQEKMQKIYEKIGL---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129462 for 2450 contacts (-52.8/contact) +
2D Compatibility (PS) -33764 + (NN) -15187 + (LL) 552
1D Compatibility (HY) -24000 + (ID) 6000
Total energy: -207861.0 ( -84.84 by residue)
QMean score : 0.468
|
|
|