Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEIVIASNNQGKINDFKVIFPD-YHVIGISELIPDFDVEETGSTFEENAILKSEAAAKALNKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVISMSG--PDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRNAINLLQAFLEGEKNV
2I5D Chain:A ((8-189))
-KKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKI---DLPEYQGEPDEISIQKCQEAVRQVQGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKP-----EGLHQLLAGFEDKSAYALCTFALSTGDPSQPVRLFRGRTSGRIVAPR-GCQDFGWDPCFQPDGYEQTYAEMPKAEKNAVSHRFRALLELQEYF------
General information:
TITO was launched using:
RESULT:
Template:
2I5D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48896 for 1382 contacts (-35.4/contact) +
2D Compatibility (PS) -19377 + (NN) -8543 + (LL) 724
1D Compatibility (HY) -10800 + (ID) 2650
Total energy: -89542.0 ( -64.79 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_2I5D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I5D-query.scw
PDB file :
Tito_Scwrl_2I5D.pdb
: