Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNY-DQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARV--VNQTAKHYYVEVKSYVKHTLVFKGNFKMFYDKRG
2F3X Chain:B ((13-155))
-------------------------------------------ELSIPELRERIKNVAEKTLEDEVKSLSLDEVIGEIIDLELDDQAISILEIKQEHVFSRNQIARGHHLFAQANSLAVAVIDDELALTASADIRFTRQVKQGERVVAKAKVTAVEKEKGRTVVEVNSYVGEEIVFSGRFDMYRSK--
General information:
TITO was launched using:
RESULT:
Template:
2F3X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69313 for 1024 contacts (-67.7/contact) +
2D Compatibility (PS) -14560 + (NN) 793 + (LL) 3420
1D Compatibility (HY) -13200 + (ID) 3250
Total energy: -96110.0 ( -93.86 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2F3X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F3X-query.scw
PDB file :
Tito_Scwrl_2F3X.pdb
: