Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEIETIISEIEKLL--TNNTPYSISKNSGVPRQTVTDLKVGKTKIKEAKFKTIIKLYEYQRTLENKTEC
2WIU Chain:B ((11-80))
----TQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFENNP---DNTTLTTFFKILQSLELSM-----
General information:
TITO was launched using:
RESULT:
Template:
2WIU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -596 for 358 contacts (-1.7/contact) +
2D Compatibility (PS) -5886 + (NN) -718 + (LL) 952
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -8948.0 ( -24.99 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_2WIU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WIU-query.scw
PDB file :
Tito_Scwrl_2WIU.pdb
: