Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHLFEGVGVALTTP-FTNNKVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKERILKTVIDLVDKRVPVIAGTGTNDTEKSIQASFQAKALGADAIMLITPYYNKTNQRGLVKHFEAITDAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRIDT--NSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQ-----ALYDAQQSGLDIQDQFKPIGTLLSALSVDINPIPIKALTSYLEFGNYELRLPLVSLEDTDTKVLREAYDTFKAGENE |
| 3PUE Chain:A ((2-284)) | ----IQGSIVAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIKDATGD---VPRGKALIDALNGKMAVYSGDDETAWELMLLGADGNISVTANIAPKAMSEVCAVAIAKDEQQAKTLNNK---IANLHNILFCESNPIPVKWALHEMGLIDTGIRLPLTPLAEQYREPLRNA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PUE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133271 for 2413 contacts (-55.2/contact) +
2D Compatibility (PS) -29822 + (NN) -13487 + (LL) 1228
1D Compatibility (HY) -19600 + (ID) 5350
Total energy: -200302.0 ( -83.01 by residue)
QMean score : 0.518
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