Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQGTVKWFNAEKGFGFIEVE-GENDVFVHFSAINQDGYKSLEEGQAVEFEVVEGDRGPQAANVVKL
1MJC Chain:A ((7-70))
---GIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKSLDEGQKVSFTIESGAKGPAAGNVTSL
General information:
TITO was launched using:
RESULT:
Template:
1MJC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35446 for 421 contacts (-84.2/contact) +
2D Compatibility (PS) -6759 + (NN) -506 + (LL) 392
1D Compatibility (HY) -6000 + (ID) 2050
Total energy: -50369.0 ( -119.64 by residue)
QMean score : 0.780
(partial model without unconserved sides chains):
PDB file :
Tito_1MJC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MJC-query.scw
PDB file :
Tito_Scwrl_1MJC.pdb
: