Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYLESLYWIHERTKFGIKPGVKRMEWMLAQFNNPQNNIKGIHVGGTNGKGSTVAYLRTALVENGYEVGTFTSPFIETFNERISLNGVPISNDAIVELVSRIKPVSEMM-ERE---TDLGVATEFEIITAMMFLYFGEIHPVDFVIVEAGLGIKNDSTNVFTPVLSILTSIGLDHTDILGGTYLDIARDKGAIIK----PNVPVIYAVKNEDALKYVRERAIEQHAKPIELDR--EIVVVS--Q-ND--EFTYRYKDYELETIILSMLGEHQKQNAALAITALIELN-EQGLIELDFNKMIDGIE-SVRWTGRIEQVHDKPLIILDGAHNSESIDALIDTIKQYHDKEKVDILFSAINGKPINEMVKHLSLIAHTFYATEFDFPKALRKEEIVGSIEN-D---EIQLVDDYVEFIKN----Y-----------QGDTLVITGSLYFISEVKSKLDFEAL |
2VOS Chain:A ((30-486)) | -----VEHLLDQRW--RIDPSLTRISALMDLLGSPQRSYPSIHIAGTNGKTSVARMVDALVTALHRRTGRTTSPHLQSPVERISIDGKPISPAQYVATYREIEPLVALIDQQSQAS---PAMSKFEVLTAMAFAAFADA-PVDVAVVEVGMGGRWDATNVINAPVAVITPISIDHVDYLGADIAGIAGEKAGIITRAPSPDTVAVIGRQVPKVMEVLLAESVRA--DASVAREDSEFAVLRRQIAVGGQVLQLQGLGGVYSDIYLPLHGEHQAHNAVLALASVEAFFGA----QLDGDAVRAGFAAV-TSPGRLERMRSAPTVFIDAAHNPAGASALAQTLAHEFDFRFLVGVLSVLGDKDVDGILAALEPVFDSVVVTHNGSPRALDVEALALAAGERFGPDRVRTAENLRDAIDVATSLVDDAAADPDVAG-RTGIVITGSVVTAGAARTLFGRDP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VOS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242718 for 3697 contacts (-65.7/contact) +
2D Compatibility (PS) -44268 + (NN) -18450 + (LL) 1896
1D Compatibility (HY) -20000 + (ID) 5050
Total energy: -328590.0 ( -88.88 by residue)
QMean score : 0.468
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