Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
2OFK Chain:A ((2-183))
-QRCDWVSQDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPIRIAAMQEEDVERLLQNTGIIRHRGKIQAIISNARAWLAMEQNGESFADFVWSFVDGQPQITQAASLDKIPTSTPASDALAKALKKRGFKFVGTTICYSFMQACGLVNDHITGCFCHP---
General information:
TITO was launched using:
RESULT:
Template:
2OFK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84220 for 1426 contacts (-59.1/contact) +
2D Compatibility (PS) -19393 + (NN) -7356 + (LL) 236
1D Compatibility (HY) -16000 + (ID) 3650
Total energy: -130383.0 ( -91.43 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_2OFK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OFK-query.scw
PDB file :
Tito_Scwrl_2OFK.pdb
: