Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDFEKPLFEIRNKIESLKESQDKNDVDLQEEIDMLEASLERETKKIYTNLKPWDRVQIARLQERPTTLDYIPYIFDSFMELHGDRNFRDDPAMIGGIGFLNGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFNRPIFTFIDTKGAYPGKAAE---ERGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANKVLML-ENSTYSVISPEGAAALLWKDSNLAKIAAETMKITAHDIKQLGIIDDVISEPLGGAHKDVEQQALAIKSAFVAQLDSLESLSRDEIANDRFEKFRNIGSYIE |
| 3U9R Chain:B ((111-287)) | ---------------------------------------------------------------------------------------------IVAGIGRVEGVECMIVGND--ATVKGGTY------YPLTVKKHLRAQAIALENRLPCIYLVDSGGANLPRQDEVFPDREHFGRIFFNQANMSARGIPQIAVVMGSCTAGGAYVPAMSDETVMVREQATIFLAGPP-----LVKAATGEVVSAEELGGADVHCKVSGVADH---------YAEDDDHALAIARRCVANLN-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56529 for 1370 contacts (-41.3/contact) +
2D Compatibility (PS) -18622 + (NN) -6099 + (LL) 9256
1D Compatibility (HY) -8400 + (ID) 2350
Total energy: -82744.0 ( -60.40 by residue)
QMean score : 0.497
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