Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITFENIQQLEKYTLMTMHGLFNQLKLGIISIDNAEHTLFTPYMMESLSSLGVKPDIIDLI---HKGTELEDFAAFNLSIEDTVTVCLQRTEELLNQYKNVEFNDKILINWRIIQE
2FMC Chain:A ((1-82))
ATT--------------------------IGPNTCSIDDYKPYCCQSMSGPAGSPGLLNLIPVDLSASLGCVVGVIGSQCGASVKCCKDDVTN--------TGNSFLIINAANCVA
General information:
TITO was launched using:
RESULT:
Template:
2FMC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24831 for 473 contacts (-52.5/contact) +
2D Compatibility (PS) -7884 + (NN) 3344 + (LL) 3060
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -30211.0 ( -63.87 by residue)
QMean score : 0.174
(partial model without unconserved sides chains):
PDB file :
Tito_2FMC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FMC-query.scw
PDB file :
Tito_Scwrl_2FMC.pdb
: