Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKK-RLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN
1UB4 Chain:A ((6-111))VPDMGDLIWVDFDP-------GHRPAVVLSPFMYNNKTGMCLCVPCTTQSK--GYPFEVVLS----GQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG---------


General information:
TITO was launched using:
RESULT:

Template: 1UB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -49799 for 725 contacts (-68.7/contact) +
2D Compatibility (PS) -10616 + (NN) -138 + (LL) 1380
1D Compatibility (HY) -5200 + (ID) 950
Total energy: -65323.0 ( -90.10 by residue)
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_1UB4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UB4-query.scw
PDB file : Tito_Scwrl_1UB4.pdb: