Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTFKAVRFQIVNEHGRIIEYELEDGVIINKEESGTGWLLEIVISNEHYETFKEYQDNEQLLDIRVVITRPANDPALFESTVKSIKNFKTTMSIVFECHIYT---------LRQQYAESLLEQLIDDGLSGEELKKSFNRMMQSKPKLKDEKLEE
3NR7 Chain:A ((22-78))
--------------------------------------------------------------------------------TLETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADGIDPNELLNS------------------
General information:
TITO was launched using:
RESULT:
Template:
3NR7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2261 for 191 contacts (-11.8/contact) +
2D Compatibility (PS) -5161 + (NN) -2570 + (LL) 7812
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -5130.0 ( -26.86 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_3NR7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NR7-query.scw
PDB file :
Tito_Scwrl_3NR7.pdb
: