Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKKIMTIFGTRPEAIKMAPLVKALEQEKML-EPIVVVTAQHREMLDSVLSTFEIKPKYDLNIMKSGQTLSEITSKSITQLEQVIQLEKPDMVLVHGDTMTTFAGGLAAFYNQVPIGHVEAGLRSYDKYSPFPEEVNRQLVGVLADLHFAPTKNAASHLLSEGKYSESVVVTGNTAIDAMKYTVDDN--------YKS-NIMDKY-HDKKFILMTAHR--RENIGKPMENIFKAVRRLIDEYTDLALVYPM-HKNPKVREVAQKILGSHDRIELIEPLDVVDFHNFAKKSYFILTDSGGIQEEAPSFNKPVLVLRSVTERPEGVEAGTLKVIGTNKQNVYQAAKELIDDERLYHQMSEASNPYGDGFASERIVNHIKYYLNLITEKPSDF |
| 3DZC Chain:A ((24-395)) | AMKKVLIVFGTRPEAIKMAPLVQQLCQD-NRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAPTDTSRANLLQENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFP--MLDASKKLILVTGHRRES-FGGGFERICQALITTAEQHPECQIL-YPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDSGGIQEEAPSLGKPVLVMRETTERPEAVAAGTVKLVGTNQQQICDALSLLLTDPQAYQAMSQAH----NPYGDGKACQRIADILA--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -168090 for 3017 contacts (-55.7/contact) +
2D Compatibility (PS) -38412 + (NN) -12346 + (LL) 252
1D Compatibility (HY) -29600 + (ID) 8250
Total energy: -256446.0 ( -85.00 by residue)
QMean score : 0.585
|
|
|