Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKAKEIRDLTTSEIEEQIKSSKEELFNLRFQLATGQLEETARIRTVRKTIARLKTVAREREIEQSKANQ
4IOA Chain:V ((1-56))
MKPSEMRNLQATDFAKEIDARKKELMELRFQAAAGQLAQPHRVRQLRREVAQLNTV-------------
General information:
TITO was launched using:
RESULT:
Template:
4IOA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4086 for 292 contacts (-14.0/contact) +
2D Compatibility (PS) -5993 + (NN) -1460 + (LL) 1200
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -17139.0 ( -58.70 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_4IOA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IOA-query.scw
PDB file :
Tito_Scwrl_4IOA.pdb
: