Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLENQLAELKYDYVRLQGDLEKRESLNLDTSALVRQLKDIENEIRNVRAQMQD
3VN0 Chain:A ((220-260))
--SERQILRLKQINIQLAT----------KIQHLEFSSSEKEQEIERLNKLLK-
General information:
TITO was launched using:
RESULT:
Template:
3VN0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2406 for 155 contacts (15.5/contact) +
2D Compatibility (PS) -4449 + (NN) -2982 + (LL) 820
1D Compatibility (HY) -800 + (ID) 450
Total energy: -5455.0 ( -35.19 by residue)
QMean score : 0.382
(partial model without unconserved sides chains):
PDB file :
Tito_3VN0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VN0-query.scw
PDB file :
Tito_Scwrl_3VN0.pdb
: