Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRNRVMNSVVNKYLLHNRSIMFKNDQDVERFFYKREIENRKKHKQPSTLNVKANLEKLSLDDMQVFRFNFRHQIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPE----FHIDDTFQAIQRVYDQLVSEVGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKL-YLISPILDATLSNKDISD---ALIEQDAVLSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREMTHPDMKLFEQMMLQHHQYIEFYDYPKMVHDF-PIYP-IRQSHKAIKQIAKSIDEDVTQNN |
| 3AIM Chain:A ((93-313)) | ------------------------------------------------------------------------------LVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAA--VTAILSKKENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFG-QQYLRSFAD---LLDFRFSPILADLNDLPPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVEFNNVIHGFVSFFPFIEQGRDAIGLIG----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94108 for 1753 contacts (-53.7/contact) +
2D Compatibility (PS) -22199 + (NN) -10190 + (LL) 6700
1D Compatibility (HY) -14000 + (ID) 2800
Total energy: -136597.0 ( -77.92 by residue)
QMean score : 0.494
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