Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITS--KRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSR-TTYSDLKKYPYIKRMIWPFQYNISLKTKDSNVDLI-NYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNYS--KTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQY-------LFAQDPTGPA-ARDYFVPDNQLPPLIQSGFNPSFITTLSHER-GKGDKSEFEITYGRNMDATYAYVTRHRLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK |
| 4IDJ Chain:A ((15-293)) | ----------------------------------DIGSNTTV--KTGDLVTYDKENGMLKKVFYSFIDDKNHNKKLLVIRTKGTIAGQYRVYSE--EGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDT---------SIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAADNFLDPNKASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWTDRS-SERYKIDWEKEEM-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IDJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45881 for 1917 contacts (-23.9/contact) +
2D Compatibility (PS) -27063 + (NN) -8289 + (LL) 4092
1D Compatibility (HY) -14400 + (ID) 3550
Total energy: -95091.0 ( -49.60 by residue)
QMean score : 0.306
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