Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMNKLVKSSVATSMALLLLSGTANAEGKITPVSVKKVDDKVTLYKTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINSGFVKPNPNDYDFSK-LYWGAKYNVSISSQSND-SVNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNGNTAFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSSAYAGQNFIAQHQMPLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDLYQ-----IRWNGFYWAGANYKN-FKTRTFKSTYEIDWENHKVKLLDTKETENNK |
| 4J0O Chain:A ((11-287)) | ----------------------------------IENIGDGAEVVKRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKNTDHIKAMRWPFQYNIGL--KTNDPNVDLINYLPKNKIDSVNVSQTLGYNIGGN--FNSG-----NGSFNYSKTISYNQQNYISEV-EHQNSKSVQWGIKANSFITS----LGKMSGHDP---NLFVGYKPYSQNPRDYFVPDNELPPLVHSGFNPSFIATVSHEKGSGDTSEFEITYGRNMDVTHATRRT--AGNSYLEGSRIHNAFVNRNYTVKYEVNWKTHEIKV---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37155 for 2068 contacts (-18.0/contact) +
2D Compatibility (PS) -27862 + (NN) -9151 + (LL) 2860
1D Compatibility (HY) -20800 + (ID) 4450
Total energy: -96558.0 ( -46.69 by residue)
QMean score : 0.356
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