Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQEILNVEGMSCGHCKSAVESALNNIDGVTSADVNLENGQVSVQYDDSKVAVSQMKDAIEDQGYDVV
1S6O Chain:A ((7-67))
-----MKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFP--
General information:
TITO was launched using:
RESULT:
Template:
1S6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37748 for 389 contacts (-97.0/contact) +
2D Compatibility (PS) -6604 + (NN) -1498 + (LL) 992
1D Compatibility (HY) -6800 + (ID) 1000
Total energy: -52658.0 ( -135.37 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_1S6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6O-query.scw
PDB file :
Tito_Scwrl_1S6O.pdb
: