Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTKQSQDFLEKLRVELLFRGKTEAEVEELLEELEDHLTMAEKNNEDTSSIINTPIKSMADQLSPEISLT-TGLYKYITLYFSFILAVIIIPRFLDLGTFDVTIAFLLYIASIVILGVV--IGMLILRNTLVRFGDQKITYVINVTYGIVVFLWMIFGGLIIKKYPIYSFFELSDKQSFIVGLVLLIALIVICILIKQKIYALIVLVISLPSLIARIAAIFSKEPDTFNLVSVSILIILNIAFIIYTFVNFRKLKKED |
2DRD Chain:A ((328-420)) | ----------------------------------------------DTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVL-LGTFAVLAAFGFSINTLTMFGMVLAIGLLV------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DRD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64458 for 418 contacts (-154.2/contact) +
2D Compatibility (PS) -7398 + (NN) 6382 + (LL) 18204
1D Compatibility (HY) -9600 + (ID) 1150
Total energy: -58020.0 ( -138.80 by residue)
QMean score : 0.224
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