Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGVFIPFPKVPKH--------QSVPLALHFTEHYARFI---PTILSVAIPLIQRDAVGLFQVANASIAT---------------TFLTHATKRALNHVTINDQ-------RLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSVKKYLWLLPLIPLTMLARIYLDMH----TIGAVLAGLGTGM---LCVGLFTSPKNLN-- |
| 5CPC Chain:A ((30-317)) | KAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMH-----PCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99447 for 1179 contacts (-84.3/contact) +
2D Compatibility (PS) -19010 + (NN) -1855 + (LL) 172
1D Compatibility (HY) -4800 + (ID) 1750
Total energy: -126690.0 ( -107.46 by residue)
QMean score : 0.212
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