Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------ML---LNYDFLELVDD-----EPQRNTSLTSAIDKALADKKLA--RQNKPRVRVKDN-----------------LSLSETLDA--YGREL--------SRLKNQQETIKASTIESSNLNSIVNKIKSGLPFGTISAFRPFKEAFIKDFTQDERELLVEA-------YKSGYKASQLDKVSK--KWRDDPNPIDAS-------YLADA-FLREYRTIALKLSTALGKPFVNKFLNPKSETTMKDFMSSEKFVKKYRFTQKDNIKRTQELKSLLDQKR------------HFLGYLQVT------------GYWKDKLNDP----LLPSKEVSFFVFQNEPSNSFNLKDQLLDLAKYFNQEAICYCQNAETGK-------VDL-VLATEKDFGKVDM----------------TFTG----ITFTIPLTQSITRLHNKVYTFFD-------------KQGKDNYG------VFFDELSTTKLKAMSIPKIADEFYRHLENRVKSFIRAR-----------QYHGSPRT-----------FDADDIEKYE----LQAIKRLDLQRCAKSKSFKASYNHNIKI--NNLANALRQGKEVSKTLITKVLANTIDTDAGYCFISDLATQL---GNISPRLSKSIVTAIEQAEGIRLLYALIDKVSYNSLHNTL---NFIFDIDNPMSDQSLNELVVE---------VPREALKNVKLPQIKN-ELTSQIFDGA-----------------------YQFR---GNDYQFKG- |
| 4UFC Chain:A ((21-807)) | DLKLWYSQPAQNWSEALPIGNSRLGAMVYGGIEREELQLNEETFWAGSPYNNNNPNAVHVLPVVRKLIFEGRNKEAQRLIDANFLTQQHGMSYLTLGSLYLEFPEHQNGSGFYRDLNLENATTTTRYQVDDVTYTRTTFASFTDNVIIMHIKASKA-NALNFTIAYNCPLVHKVNVQNDQLTVTCQGKEQEGLKAALRAECQIQVKTNGTLRPAGNTLQINEGTEATLYISAATNYVNYQDVSADESHRTSEYLKRAMQIPYEKALKNHIAYYKKQFDRVRLTLPAGKASQLETPKRIENFGNGEDMAMAALLFHYGRYLLISSSQPGGQPANLQGIWNNSTHAPWDSKYTININTEMNYWPAEVTNLSETHSPLFSMLKDLSVTGAETARTMYDCRGWVAHHNTDLWRICGVVDFAAAGMWPSGGAWLAQHIWQHYLFTGNKEFLKEYYPILKGTAQFYMDFLVEHPVYKWLVVSPSVSPEHGPITAGCTMDNQIAFDALHNT-LLASYIAGEAPSFQDSLKQTLEKLPPMQIGKHNQLQEWLEDIDNPKDEHRHISHLYGLYPSNQISPYSNPELFQAARNTLLQRGDKATGWSIGWKVNFWARMLDGNHAFQIIKNMIQLLPNDHLAKEYPNGRTYPNMLDAHPPFQIDGNFGYTAGVAEMLLQSHDGAVHLLPALPDAWEEGSVKGLVARGNFTVDMDWK--NNVLNKAIIRSNIGSTLRIRSYVPLKGKGLKQVNGKECSNRLFATTPIKQPLVAKGVSAQSPKLQKVYEYDIETKAGKTYIVNTI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UFC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2465 for 3985 contacts (0.6/contact) +
2D Compatibility (PS) -57836 + (NN) -333 + (LL) 376
1D Compatibility (HY) -18800 + (ID) 5350
Total energy: -79478.0 ( -19.94 by residue)
QMean score : 0.148
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