Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHDAYEIILSWFITPLTAILGRFAEFF-LYTLHAQLVFNSAVALAFMLFA------------------YR----SLKEQNFFSASALLEALWF-----------VGFFALFNYALKNPSRFYELFQNAIFIAPNMITQSLSQSLSNFSNHALSLDFIFNHGFYALSFISDLSHNE---------------MSVWLFLSILQALFLSVLFAIIILVY----------LEAHVWCSLGALFLAFGF-FKTWRSVVVICLKKCFALGFYK---------PFLLLVGFLNVSVTKALMDASMQEKQDLSLLLV----VALFLCCVFIIGVPFFINALFR-----------VQNSLKETYKLATNLSANLTQSA-FQSLQHATTSPAPSHISSSASQSVSKEKETHSPTFK----VETTQLDVKIPNFKQKKVKKDTIDTKNEI--------------------------------- |
| 2Q06 Chain:A ((22-496)) | --ATEIRASVGRMVGGIGRFYIQMCTELKLSDQEGRLIQNSITIERMVLSAFDERRNRYKDPKKTGGPIYRRRDGKWVRELILYDKEEIRRIWRQANNGEDATAGLTHMMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAA--IKGVGTMVMELIRMIKRGINDRNFWRGENGRRTRIAYERMCNILKGKFQTAAQKAMMDQVRESRNPGNAEIEDLIFLARSALILRGSIAHKSCLPACVYGLAVASGYDFEREGYSLVGIDPFRLLQNSQVFSLIRP--NENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVIPRGQLSTRGVQIASNENVEAMDSSTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATIMAAFKGNTEGRTSDMRTEIIRMMESARPEDVSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAEEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266861 for 2492 contacts (-107.1/contact) +
2D Compatibility (PS) -35567 + (NN) -6746 + (LL) 712
1D Compatibility (HY) -8800 + (ID) 2750
Total energy: -320012.0 ( -128.42 by residue)
QMean score : 0.277
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