Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGHVVLSTPIVTMFVVYSLLMLYIGFYFYKQNETTEDYFLGDRSMGPVISALSAGA-----SDMSGWLLMGLPGALYV-GGLINSHIAIGLSLGALINWVFVAKRLRIYTSVIANSITISDYFETRFSDDKHILRLISAFVILIFFIFYISSGLVSGAKLFEATFGIQYT-------YALSIGTLIIVSYTFLGGYKAVCWTDLIQGLLMMSALIVVPIVMIIHLGGIGEGIKIIREIKPENLSFLQGSSVVAII----------SSLAWGLGYFGQPHILVRFMSIRSIRDVPKATTIGISWMVISLIGACVMGLLGVAYVHKFDLSLEDPEKIFIVMSQLLFNPWITGILL-------SAILAAVMSTASSQLLVSSSTIAEDFYATIFNKNAPQKLVM-TISRLSVLGVACIAFFISTDKNASILSIVSYAWAGFGASFGSVILFSLFWSRMTRIGAIAGMLSGASTVILYDKFGKSFLDIYEIVPGFIVASVA------IVAFSLFSSVRSGT--------KEAFETMLKEIESLKH----- |
4IWS Chain:A ((23-515)) | MNRSALD------FRHFVDHLRRQGDLVDVHTEVDANLEIGAITRRVYERRAPAPLFHNIRDSLPGARVLGAPAGLRADRARAHSRLALHFGLPEHSGPRDIVAMLRAAMR--AEPIAPRRLERGPVQENVWLGEQVDLTRFPVPLLHEQDGGRYFG------TYGFHVVQTPDGSWDSWSVGRLMLVDRNTLAG----------------------PTIPTQHIGIIREQWR--RLGKPTPWAMALGAPPAALAAAGMPLPEGVSEAGYVGALVGEPVEVVR--TQTNGLWVPANTEIVLEG-EISLDETALEGPMG--EYHGYSFPIGKPQPLFHVHALSFRDQPILPICVAGTPPEENHTIWGTMISAQLLDVAQNAGLPVDMVWCSYEAATCWAVLSIDVQRLAALG---------TDAAAFAARVAETVFGSHAGHLVPKLILVGNDIDVTEIDQVVWALATRAHP-LHDHFAFPQIRDFPMVPYLDAEDKARGSGGRLVINCLYPEQFAGQMRAATASFRHAYPTALRRRVEERWSDYGF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -374040 for 3729 contacts (-100.3/contact) +
2D Compatibility (PS) -45530 + (NN) 8074 + (LL) 7060
1D Compatibility (HY) -2800 + (ID) 4150
Total energy: -411386.0 ( -110.32 by residue)
QMean score : 0.199
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