Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTIKNGIMIGTLGALLLSGCSSFDAQRFACLPKDHSSKDASTKKEAQYIP--KGFFDPYSSNLNHWDSTF
3N61 Chain:A ((22-78))
------------LKSTLETGCTEHICMGSIVLP-----------TKDQLFPLAKEFLDQYYSSIKRFGSKA
General information:
TITO was launched using:
RESULT:
Template:
3N61.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2151 for 159 contacts (13.5/contact) +
2D Compatibility (PS) -4302 + (NN) 2075 + (LL) 1032
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -2944.0 ( -18.52 by residue)
QMean score : -0.015
(partial model without unconserved sides chains):
PDB file :
Tito_3N61.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N61-query.scw
PDB file :
Tito_Scwrl_3N61.pdb
: