Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTYAQESKL--RLKTKIGADGRCVIEDNFFTPPFKLMAPFYPKDDLAEIMLLAVSPGLMKGDAQDMQLNIGPNCKLRIT----SQSFEKIHNTEDGFASRDMHIVVGENAFLDFAPFPLIPFENAHFKGNTTISLRSSSQLLYSEIIVAGRVARNELFKFNRLHTKISILQDEKPIYYDNTILDPKTTNMNNMCMFDGYTHYLNLVLVNCPIELSGARELIEESEGVDGAVSKIASSHLCLKALAKGSEPLLHLREKIARLVTQTTTQKV |
1YVE Chain:I ((12-236)) | ATTFDFDSSVFKKEKVTLSGHDEYIVRGG--RNLFPLLPDAFKGIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGT-----------------LGDMWETISGSDLVLLLISDSAQADNYEKVFSHMKPNSILGLSH---------GFLLGHLQSLGQDFPKN--------------ISVIAVCPKGMGPSVRRLYVQGKEVNGA-GINSSFAVHQDVDGRATDVALGWSIALGSPFTFATTLEQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10488 for 1829 contacts (5.7/contact) +
2D Compatibility (PS) -22727 + (NN) -1777 + (LL) 3268
1D Compatibility (HY) -2000 + (ID) 1400
Total energy: -14148.0 ( -7.74 by residue)
QMean score : 0.143
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