Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIIAHSNEIAHPIFKSADKLFTLYQGDCNEVLPQ-FENAFDLIFADPPYFLSNDGLSIQSGKIVSVNKGDWDKENGINDIDEFNYQWINNAKKALKNTGSLLISGTYHNLFSLGRILQKLDFKILNLITWQKTNPPPNFSCRYLTHSAEQIIWARKSYKHKHVFNYEILK-------------------------KINNNKQMRDVWNFPAIAPWEKANGKHPTQKPLALLVRLLLMASDDNSLIGDPFSGSSTTGIAANLLKREFIGIEKESRFIKISMNRKLELDARHQEIRSKIKDLNFQ |
1G60 Chain:A ((3-256)) | ------------------EINKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWD---------------SFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPFNCAFICQYLVSKGMIFQNWITWDKRDGMG-SAKRRFSTGQETILFFSKSKNH--TFNYDEVRVPYESTDRIKHASEKGILKNGKRWFPNPNGRLCGEVWHFS-------------TPKPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQ------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69435 for 1597 contacts (-43.5/contact) +
2D Compatibility (PS) -22090 + (NN) -9454 + (LL) 4112
1D Compatibility (HY) -11600 + (ID) 3150
Total energy: -111617.0 ( -69.89 by residue)
QMean score : 0.423
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