Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRNEVLLNGDINFKEVRCVGDNGEVYGIISSKEALKIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQIAQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEPK-TEGRFVSWMFVPKAKEAPKNEKKTKENNPPFNRINLMKGENHAKNED |
2IFE Chain:A ((90-179)) | ----------------------------------------------------------------------------------VIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVESFPTKIEGRQMIMVLAPKKKQ------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31359 for 637 contacts (-49.2/contact) +
2D Compatibility (PS) -9539 + (NN) -4459 + (LL) 6516
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -46291.0 ( -72.67 by residue)
QMean score : 0.433
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