Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQENVPLSYDYSISKLFLYAMIAFGIIGMLIGIVLAFELSFPSLNYIAGEYGVFGRLRPLHTNAVIYGFTLGGIWASWYYIGQRVLKITYHQHPFLKIVGLLHFWLWILLLVLGVISLFAGLTQSKEYAELMWPLDIIVVVAWVLWGVNMFGSMSVRRENTIYVSLWYYIATYVGIAVMYIFNNLSIPTYFVADMGSVWHSISMYSGSNDALIQWWWGHNAVAFVFTSGVIGTIYYFLPKESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYST--VPDWVQTLSSVFSVVLILPSWGTAINMLLTM---------RGQWHQLKESPLIKFLVLASTFYMLSTLEGS----IQAIKSVNALAHFTDWIIGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMTLGIVLYFSSMWIAGITQGMMWRDVDQYGNLTY--QFIDTVK-ALIPY-YNIRGVGGLMYFIGFIIFAYNIFMTITAGKKLEREPNYATPMAR |
| 4GP4 Chain:A ((235-508)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WWTGHPIVYFWLLPA-YAIIYTILPKQAGGKLVSDPMARLAFLLFLLLSTPVGFHHQFADPGIDPTW-KMIHSVLTLFVAVPSLMTAFTVAASLEFAGRLRGGRGLFGWIRALPWDNPAFVAPVLGLLGFIPGGAGGIVNASFTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNLTGKPIS-----DAQRRLGLAVVWLWFLGMMIMAV--GLHWAGLLNVPRRAYIAQVPDAYPHAAVPMVFNV--LAGIVLLVALLLFIYGLFSVLLSR---ERKPELAEAPLP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -179826 for 1941 contacts (-92.6/contact) +
2D Compatibility (PS) -25323 + (NN) 1646 + (LL) 19652
1D Compatibility (HY) -24400 + (ID) 3400
Total energy: -211651.0 ( -109.04 by residue)
QMean score : 0.239
|
|
|