Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MASGLFENDEIKNNKARDFFYSHSSLIVFFLLLLGFGYYLGKLLFGGSSLEVYLDLRDKH------------ERLQQEITELQSKNVRLQKRLFELRELRPRD
4UVA Chain:A ((429-480))
----------------------------------------------GQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQ-----
General information:
TITO was launched using:
RESULT:
Template:
4UVA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1171 for 143 contacts (8.2/contact) +
2D Compatibility (PS) -4535 + (NN) -3613 + (LL) 3220
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -8157.0 ( -57.04 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_4UVA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UVA-query.scw
PDB file :
Tito_Scwrl_4UVA.pdb
: