Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MLKKMI-GLVAVLSVLLA-------RDNPF---------------------EPEINSKNLQGGFSGIYDDYLKEIHVDLPT-SARILKKITLTYQDIDGSIHSKVVGIDKSIDWHY------------------------PLKLS----QHTLNQDAFEK-RYQIQ-------DFDFLMANNT----------MILRSPYKILRSFVLVN-PYR-IV---L-DTQKGPLDI-YQNMDLNQKFFSHIKVGTH-K-DYYRITLILDGKYRYLLEE-KNGAYELKLK-- |
| 4H3W Chain:A ((38-350)) | ESWVAPLGMGYVTSDDVVNVEVPSIREVDGAYVMIYDGEMIGSLRAASDVEIASEDITTGDIDGLFDGDFVLALTNPHITLSNVNASLDCSLSIEAENTSEATSSDFTLSTVSPNIWIGPLDPTDAFFVNELPGIVQIVPQIHLSLSADSQWTNAPADALSELRYAVELPLTPAPEFSAVSVERIEDAFDEDFVDYIFSDGSARIYGEVTNEMPFDMSIEMVIMDENNVPVDIQFPAQEVGQSGEVIFEITEDMPMDARHIDLNLHLTGRDQGEALGQTTFNLLEGGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H3W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19279 for 1062 contacts (18.2/contact) +
2D Compatibility (PS) -19213 + (NN) 11559 + (LL) 0
1D Compatibility (HY) 13600 + (ID) 400
Total energy: 24825.0 ( 23.38 by residue)
QMean score : -0.061
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