Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNRQISKMQAEIKMAKSFFVLDAKGMLMLKPSQFKEQGHKEGLLEHDLTEGIELESHVSFSDKYYFYQAVNEK--RCILTDPYPSKKGNHLVVSASYPVYDQNNDLAFVVCLQIPLRVAIEISSPSKYFKTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVHFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVLGKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAIGVAVLLISLAIYVKFAYSVLPKRER |
| 3LIF Chain:A ((54-161)) | -------------------------------------PVFNERLRALADNLPQLSDVAILDADGQLTYASVKP-V-------------------PALDNSDRSYFRYHRANDDHTLLITGPIQSRTSGVWVFVVSRRLETTDGKFFGVVVATIESEYFSTFYKTFDLGPGGSISLLHSDGRLLIQWPSLQTGRDMANMVLFQKALPRSPDGYYLTVSPFDGLTKYLAYRRVSRYPLVVTVARTEDSVLSG---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43297 for 752 contacts (-57.6/contact) +
2D Compatibility (PS) -11633 + (NN) -4796 + (LL) 12124
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -53702.0 ( -71.41 by residue)
QMean score : 0.249
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