Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGRMELKNIISETLNEIEKMAKTIDDGFNTAQKTPSFFKTPSHLQNTPNSKNANTPLEPKNAAKIETQEKITEEKEEAKEIITEEIVQENPTQALIPNER---VFLKGLLERTLVLFKGMQALEEKEALKRLDLVARFLQYQLSVLEKRLESLERENTE |
4JK2 Chain:D ((1147-1233)) | -----------------------------------------------------ARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERVERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JK2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21216 for 518 contacts (41.0/contact) +
2D Compatibility (PS) -8292 + (NN) 3993 + (LL) 2784
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: 15451.0 ( 29.83 by residue)
QMean score : 0.059
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