Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEMELKLIKIDT-SHYFEKKPGLGERMDYAGRCYYNKFQRVNAMLTSSLIQKHLKREIEIAHNLILRNDKVENIVFDYNGRNPERFYHKAQLLLREEGFMNFTAYNTKTPGHLHLYVHKGHTEL-GEGERLIKT-LSMKLAQGLPKEWRVFPSNEWPKEFNILALPYEVFAKERGSSWAKHL
2FSU Chain:A ((28-210))
QDAQHSFRRLLKAMS-----EPGVIVALHQLKRGWQPLNIATTSVLLTLA-----DNDTPVWLSTPLNNDIVNQSLRFHTNAPLVSQPEQATFAVTDEA-ISSEQLNALSGATLILQVASLSGGRMLRLTG-EERMIAPQLPECILHELTERPHP-FPLGIDLILTCGERLLAIPRTTHVEVC
General information:
TITO was launched using:
RESULT:
Template:
2FSU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20505 for 1350 contacts (-15.2/contact) +
2D Compatibility (PS) -17041 + (NN) -118 + (LL) 1456
1D Compatibility (HY) 1600 + (ID) 1050
Total energy: -35658.0 ( -26.41 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_2FSU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FSU-query.scw
PDB file :
Tito_Scwrl_2FSU.pdb
: