Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLEKIQKEWLSNIQKDLLSGFVVGLSVIPETAGFAIMVGLDVGVAFYTTFYMAFVLSLFGARKAMISAAAGSVALILVGVVKNYGLEYAGVATLMAGILQILLGYLKIGNLLKFIPQSVMYGFVNALGILLLTEQFKFLQNQNLGVFVLLAIGILIIYLFPLITKKIPSNLICILAVSAIALIFDTHAPNLGSIEQGVSGFHFIIIPKNLDFKMVLGLLPYALSLALVGTIESLLTAKTLDVILKDGVSDKNKETKAQGLGNIISGLLGGMTGCALVGQSIINAKSGAKTRLSTFFAGFSLMVLILVFNEYVVKIPIVAVVAVMVIIS-FTTFNFQSIMNIKTIKLYDTLNMLLVVAVVLYTHNLAIGVVVGVLINALWIKFKGMG |
4PW8 Chain:A ((26-367)) | ----IYGNYL-HLEKVLNAQ-----ELQSETKGNKI-----------------------------------HDEHLFIITHQAYELWFKQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQ--QFSILETMT-----ALDFNDFREYLSP---ASGFQSLQFRLLENKIGVLQEENELLLKSEQEKT---LLELVEAWLERTPGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKE--ESEEKEEQVAEFQKQKEVLLS------LFDEKRHEHLLSKGERRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDIDSLMTKWRYNHVCMVHRMLGSRYKVFVDLFNLSTY------------LIPRHWIPKMN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261055 for 2118 contacts (-123.3/contact) +
2D Compatibility (PS) -30325 + (NN) 4195 + (LL) 6512
1D Compatibility (HY) -8800 + (ID) 2550
Total energy: -292023.0 ( -137.88 by residue)
QMean score : 0.236
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