Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGSNHMKNKTLVISGATRGIGKAILYRFAQSGVNIAFTYNKNVEEANKIIEDVEQKYSIKAKAYPLNVLEPEQYTELFKQVDADFDRVDFFISNAIIYGRSVVGGFAPFMRLKPKGLNNIYTATVLAFVVGAQEAAKRMQKIGGGAIVSLSSTGNLVYMPNYAGHGNSKNAVETMVKYAAVDLGEFNIRVNAVSGGPIDTDALKAFPDYVEIKEKVEEQSPLKRMGNPNDLAGAAYFLCDETQSGWLTGQTIVVDGGTTFK |
| 4JRO Chain:A ((27-268)) | ------LQGKVAVVTGGSRGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAE-HGVEVEAMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNL------LMRMKEDEWDDVININLKGTFLCTKAVSRTMMKQRAGKIINMASVVGLIGNAGQANYVASKAGVIGLTKTTARELAPRGINVNAVAPGFITTDMTDKLDE--KTKEAMLAQIPLGAYGTTEDIANAVLFLASDA-SKYITGQTLSVDGGMVM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136603 for 2063 contacts (-66.2/contact) +
2D Compatibility (PS) -26087 + (NN) -6281 + (LL) 396
1D Compatibility (HY) -12800 + (ID) 3850
Total energy: -185225.0 ( -89.78 by residue)
QMean score : 0.597
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